Protein Prediction I at TU München

Flashcards and summaries for Protein Prediction I at the TU München

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Study with flashcards and summaries for the course Protein Prediction I at the TU München

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

What is the BLAST method?

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

What is the smallest building block of life that can replicate?

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

What is the central dogma of molecular biology?

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

How many amino acids are proteins made of?

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

What is the size of the human genome?

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

How long are proteins?

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

If each nucleotide triplet encoded unique amino acid, how many different amino acids would there be? You still need one-stop codon that behaves as usual!

Select the correct answers:

  1. 63

  2. 64

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

All amino acids have the same backbone.

Select the correct answers:

  1. True

  2. False

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

Amino acids form a peptide bond through side chains.

Select the correct answers:

  1. False

  2. True

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

Most proteins are multi-domain.

Select the correct answers:

  1. True

  2. False

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

Most proteins in PDB are multi-domain.

Select the correct answers:

  1. False

  2. True

Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

What is BLOSUM Scoring Matrix?

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Exemplary flashcards for Protein Prediction I at the TU München on StudySmarter:

Protein Prediction I

What is the BLAST method?

We search for “seed” words of some size and then try to extend at those locations for matching.

Protein Prediction I

What is the smallest building block of life that can replicate?

Cells

Protein Prediction I

What is the central dogma of molecular biology?

DNA is transcribed into RNA, RNA is translated into proteins.

Protein Prediction I

How many amino acids are proteins made of?

20

Protein Prediction I

What is the size of the human genome?

20000

Protein Prediction I

How long are proteins?

from 35 to 30,000 amino acid residues

Protein Prediction I

If each nucleotide triplet encoded unique amino acid, how many different amino acids would there be? You still need one-stop codon that behaves as usual!

  1. 63

  2. 64

Protein Prediction I

All amino acids have the same backbone.

  1. True

  2. False

Protein Prediction I

Amino acids form a peptide bond through side chains.

  1. False

  2. True

Protein Prediction I

Most proteins are multi-domain.

  1. True

  2. False

Protein Prediction I

Most proteins in PDB are multi-domain.

  1. False

  2. True

Protein Prediction I

What is BLOSUM Scoring Matrix?

BLOSUM Scoring Matrix gives a score for aligning an amino acid with another.

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